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Microscopy — Interactive Lab

Chapter 2 · Part 1 — the same material as the lecture, presented as interactive stations. Select a station below to begin.

Designed & built by Dr. Meera Salama — an interactive station from the Interactive Course Laboratory series at Cyprus International University.

Microscope Anatomy — the brightfield microscope

The brightfield microscope is the most commonly used microscope: a compound microscope with two or more lenses that produce a dark image on a bright background. Every part has a job — click any glowing point on the diagram, or take the guided tour.

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Click a glowing point on the microscope to learn what that part does.

Magnification Lab — how big, and how sharp?

Total magnification is the product of the ocular lens (10×) and the objective lens. Switch objectives, focus the image, and see why the 100× lens needs a drop of immersion oil — and why viruses stay invisible at any magnification.

Focus Total: 40× · image: sharp

Seeing Techniques — one specimen, six kinds of light microscopy

The same slide looks completely different depending on the microscope technique. Switch between brightfield, darkfield, phase-contrast, DIC, fluorescence and confocal microscopy — and for confocal, move through the specimen’s depth.

Electron Microscopy — TEM vs SEM

Light microscopes stop near 1000× because visible light runs out of resolution. Electron microscopes use electron beams with wavelengths of 0.005 nm instead — reaching up to 100,000× (some, 2,000,000×). Two designs, two different views.

Slide Preparation — wet mounts and fixed smears

Before anything can be observed, the specimen must be prepared. Walk through the two basic preparations used with light microscopes: the wet mount (fast, keeps cells alive) and the fixed smear (attaches and preserves cells for staining).

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Staining Bench — making the invisible visible

Stains (dyes) are salts: the colored ion is the chromophore. Basic dyes (crystal violet, methylene blue, safranin, malachite green) carry positive chromophores that stick to negatively charged cell walls — positive stains. Acidic dyes (eosin, acid fuchsin, rose bengal) are repelled by cell walls — negative stains that color the background. A simple stain uses one dye; differential staining uses several to tell organisms apart. Step through the classic protocols below.

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Chapter Quiz — Microscopy

Twenty-two questions covering the whole chapter: the brightfield microscope and its parts, the light microscopy techniques, electron microscopy, specimen preparation and staining.

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